Online Courses/Resources on Microscopy
- MYSCOPE Microscopy Training https://myscope.training/
- https://www.ibiology.org/online-biology-courses/microscopy-series/
- https://www.jove.com/science-education/5040/introduction-to-fluorescence-microscopy
- http://zeiss-campus.magnet.fsu.edu/tutorials/index.html
- https://www.microscopyu.com/techniques/fluorescence/introduction-to-fluorescence-microscopy
Online Courses on Image Analysis
- Image Processing and Analysis for Life Scientists EPFL
https://www.edx.org/course/image-processing-and-analysis-for-life-scientists
- Basics of Image processing and analysis in ImageJ
https://figshare.com/articles/Basics_of_Image_processing_and_analysis_in_ImageJ/11991387
- 30-min Introduction to Fiji/ImageJ for bioimage/microscopy analysis. https://www.youtube.com/watch?v=bYuPcszd4PM&list=PLRLp6ok_u6HL7d4K9I0MynUG7Mkt64VK4&index=3&t=5s
- Dave Mason’s online workshop using Fiji for image analysis http://pcwww.liv.ac.uk/~cci/reveal_ia/ImageAnalysisWithFiji.html
- BioImage Analysis Course Biotechnology Center of the TU Dresden
Lecture BioImage Analysis 2020
- Fiji Scripting Tutorial
https://www.ini.uzh.ch/~acardona/fiji-tutorial/
- Icy tutorials
http://icy.bioimageanalysis.org/trainings/
- Image Processing Forum
- Python tutorials for microscopists with no coding skills https://www.youtube.com/playlist?list=PLZsOBAyNTZwYHBIlu_PUO19M7aHMgwBJr&feature=share
- Python for BioImage Analysis https://github.com/IAFIG-RMS/Python-for-Bioimage-Analysis
- Python “Zero-to-Hero” Beginner’s Course https://github.com/ChasNelson1990/python-zero-to-hero-beginners-course
- Image processing with Python for beginners
https://github.com/guiwitz/PyImageCourse_beginner
- Image processing with Python advanced
https://github.com/guiwitz/PyImageCourse
- Unix, R and Python tools for genomics and data science
- Ilastik Tutorials
https://www.youtube.com/playlist?list=PLeM_d8ZXiMCNXtVFvwAW23yXfTDsGFk5t
- Data Science in Cell Imaging
https://assafzar.wixsite.com/dsci2020/lecture-slides
- Computational image processing in microscopy
https://community.plantae.org/path/5329843597149734268
Webinar Series: Imaris Homeschool
Advanced Microscopy Webinars
- Webinars by Picoquant
https://www.picoquant.com/events/workshops-and-courses/category/webinar
- Webinars by BiteSizeBio
https://bitesizebio.com/webinars/
Electron Microscopy Resources
- Electron Microscopy Public Image Archive https://www.ebi.ac.uk/pdbe/emdb/empiar/
- EM blog collection of ThermoFischer https://www.thermofisher.com/blog/microscopy/
Start with: https://www.thermofisher.com/blog/microscopy/electron-microscopy-101/
EM history: https://www.thermofisher.com/blog/microscopy/the-history-of-the-electron-microscope/
- SerialEM and IMOD https://bio3d.colorado.edu/SerialEM/#Help
EMBO workshop
In situ Structural Biology – From Cryo-EM to Integrative Modelling 6 – 8 December 2020